BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C04LP1|AL430361
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1216 0.0
>3x_Contig919
Length = 4576
Score = 1216 bits (611), Expect = 0.0
Identities = 645/657 (98%), Gaps = 2/657 (0%)
Strand = Plus / Plus
Query: 1 gatcccgaatctacaactaatgggtatatttcatctccaattgtaacgttcacgaaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatcccgaatctacaactaatgggtatatttcatctccaattgtaacgttcacgaaatac 405
Query: 61 gcttgcgtattagaatctgtggataagatagacatccctggcttca-ccggaacttcgac 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 406 gcttgcgtattagaatctgtggataagatagacatccctggcttcaaccggaacttcgac 465
Query: 120 atttttagtcgagctttttgctgtagcttgtccctgcaaagcttgtttacttaatgcatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atttttagtcgagctttttgctgtagcttgtccctgcaaagcttgtttacttaatgcatc 525
Query: 180 attgatattgacgaattgtgctgcatatttactgttttttgactcgactttgaaagcgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 attgatattgacgaattgtgctgcatatttactgttttttgactcgactttgaaagcgga 585
Query: 240 accagcactcaagtacctttcaccagagcatggataaaaggcctgaacaaaggtcaaatt 299
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 586 accagcactcaagtacctttaaaaagagcatggataaaaggcctgaacaaaggtcaaatt 645
Query: 300 gaagatgtaagtkatcagaatgataagtctgaatacgcctgatcgtatgccatttttaaa 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaagatgtaagtgatcagaatgataagtctgaatacgcctgatcgtatgccatttttaaa 705
Query: 360 gaacatgatctcaaacaagagacagaggagaaaatatgcgtaggagaaagcaaaaaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaacatgatctcaaacaagagacagaggagaaaatatgcgtaggagaaagcaaaaaaaaa 765
Query: 420 cagcaccaatataat-aaaaacaaaggactcaattgaaccagaatctatcaagcaagaag 478
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 766 cagcaccaatataataaaaaacaaaggactcaattgaaccagaagctagcaagcaagaag 825
Query: 479 caaagaaaagttatcactttctttggaatcaattaaacttgaattattaahwagagaatt 538
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 826 caaagaaaagttatcactttctttggaatcaattaaacttgaattattaaaaagagaatt 885
Query: 539 caaatgaattggaagcagcggaaggcagataaagatggattatgcaaaagahaatttcct 598
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 886 caaatgaattggaagcagcggaaggcagataaagatggattatgcaaaagaaaatttcct 945
Query: 599 gatcactctaccagaccaaaatatcaaaacagcagaatatctagaaaahaggtgagc 655
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 946 gatcactctaccagaccaaaatatcaaaacagcagaatatctagaaaaaaggtgagc 1002
Score = 344 bits (173), Expect = 1e-94
Identities = 174/175 (99%)
Strand = Plus / Plus
Query: 747 tatatatattgatgtatctaaatagcggttttacagatctttttttctttaaaggacgaa 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tatatatattgatgtatctaaatagcggttttacagatctttttttctttaaaggacgaa 1153
Query: 807 aatctcaggtttagtatcattacccaaagaagtaatgaaaatacctgaatgaggtttacg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 aatctcaggtttagtatcattacccaaagaagtaatgaaaatacctgaatgaggtttacg 1213
Query: 867 tgaatttaagaataagctggacccaaaagacagamaaatgacgctttgaagggcc 921
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1214 tgaatttaagaataagctggacccaaaagacagacaaatgacgctttgaagggcc 1268
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8410
Number of Sequences: 1807
Number of extensions: 8410
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)